7. Export of atlas maps for the QUINT workflow

In order to export custom atlas slices corresponding to your series. Press the “export Slices” button and select the destination folder.


In the export folder, you will also find a file named “segmentation.json” for the rat atlases. This just an information file which gives an overview of the atlas regions label values of the flat files.


This file should not be confused with the anchoring JSON file used for the QUINT workflow!